Module Overview# Molecular Interaction Analyzer NPMolecularInteractionAnalyzer Interaction Calculation Methods Molecular Interaction Data Structures MolecularInteraction HydrogenBond HalogenBond PiInteraction PiPiInteraction CarbonylInteraction NPiInteraction CooperativityChain WaterBridge LigandInteraction Core Data Structures Bond Atom Residue PDB File Parser PDBParser Bond Detection Methods PDB Structure Fixer PDBFixerError PDBFixer Vecctor Support NPVec3D compute_distance_matrix() batch_angle_between() batch_dihedral_angle()